Modeling Centers and Information Resources

Image Libraries and Resources

Modeling Software and Documentation

On-Line Model Viewing: Proteins & Non-Protein Macromolecules

Molecular Modeling: General Information

Molecular Modeling: Protein Structure

Crystallography

Modeling Centers & Information Resources Biocomputing and Molecular Modeling - U Zurich (Switzerland) BioCoRE - Biological Collaborative Research Environment - Theoretical Biophysics - U Illinois Urbana-Champaign (USA) CGL - Computer Graphics Laboratory - UCSF (US) Molecular Modeling Information Resource - NIH (US) Molecular Graphics Laboratory - U Tromso (Norway) Molecular Graphics and Animation Resource - Cornell U (US) Structural Biology Software Database - Theoretical Biophysics - U Illinois Urbana-Champaign (US) The Department of Structural Biology - Stanford U School of Medicine (US) Image Libraries & Resources 3D images of Crystallized Proteins - ExPasy (Switzerland) Kinemages - Protein Science (US) Molecular Animations of Large Molecules - BioNet TLTP Project (UK) NDB - Atlas of Nucleic Acid Structure - Atlas of Nucleic Acid Structure - NDB/Rutgers U (US) The Image Library of Biological Macromolecules - IBM Jena (Germany) Modeling Software & Documentation AbM - Antibody Structure Modeling - - Oxford Molecular Group, Inc. AMBER - Oxford Molecular Group, Inc. AMPAC - Semichem AMSOL - Quantum Chemistry for Compounds in Solution - U Minnesota AutoDock - Automated Docking of Flexible Ligands to Macromolecules - Scripps Research Inst CAChe - Oxford Molecular Group, Inc. CAVEAT Cerius2 Visualizer - Molecular Simulations, Inc. CHARMM NIH CHIME - MDL Information Systems, Inc. CLIP ClogP - BioByte Corp. CloneMap - CGC Scientific, Inc. Cobra - Oxford Molecular Group, Inc. Composer - Tripos, Inc. CONCORD - Tripos, Inc. DISCO - Tripos, Inc. DIVA - Oxford Molecular DOCK FlexiDock - Tripos, Inc. FoldIt v4.1.1 FTDOCK - Molecular Docking Program - BMM (UK) GAMESS GASP - Tripos, Inc (US) Gaussian GeneDOC gOpenMol GRAMM GRASP GROMACS HBPLUS HINT HyperChem - Hypercube, Inc. ICM - MolSoft Iditis - Oxford Molecular Products InsightII - Molecular Simulations, Inc. ISIS - MDL Information Systems, Inc. Jaguar - Schrodinger, Inc. LeapFrog - Tripos, Inc. LigPLot Look - Molecular Applications Group Look - Molecular Applications Group Ludi - Molecular Simulations, Inc. MacMolecule/PCMolecule - Molecular Ventures, Inc. MacPlasmap Pro - CGC Scientific, Inc. MacPlasmap - CGC Scientific, Inc. MacroModel MAGE/KINEMAGE Mc-Sym MidasPlus MM2/MM3/MMEDIT MODELER Moil Moil-View MOLCAD - Tripos, Inc. MOLEKEL MolScript MolSurfer - EMBL-Heidelberg (Germany) MolView NAB NIH-Image PDBTool pDRAW32 - AcaClone Software PovChem ProCheck RasMol Raster3D Ribbons SCARECROW SCULPT SPARTAN - Wavefunction, Inc. STRUCTURELAB SYBYL - Tripos, Inc. UNITY - Tripos, Inc. UTHSCSA Image Tool VMD WebLab Viewer Pro - Molecular Simulations, Inc. WebMol - CMP-U California San Francisco (US) What If X-PLOR XMol XtalView On-Line Molecular Model Viewing Cn3D - See in 3D - Structure Viewer - NCBI (US) Hyperactive Molecules Using Chemical MIME - WWW Display of 3D Chemical Information - Imperial College (UK) Molecules-R-Us - NIH (US) Monosaccharide Browser - Investigate Monosaccharide Structure - U Leeds (UK) Molecular Modeling: General Information Atlas of Side-Chain and Main-Chain Hydrogen Bonding - UCL (UK) Guide to Computer-Assisted Drug Design (US) Guide to Molecular Graphics - CSB-Yale U (US) Guide to Image Display - CSB-Yale U (US) Representation of Molecular Models and Rendering Techniques - Geneva U (Switzerland) The NIH Guide to Molecular Modeling - NIH (US) Molecular Modeling: Protein Structure Atlas of Protein Side-Chain Interactions - UCL (UK) Course in Principles of Protein Structure Guide to Geometric Aspects of Protein Structure and Function - Duke U (US) MODULES in Extracellular Proteins - EMBL-Heidelberg (Germany) Crystallography Crystallography at SDSC - SDSC (US) Crystallography Protein Crystallography - Glasgow U (UK) Last modified 13 March 2003 by Christopher M. Smith at CMSMBR - SDSC Copyright © 1996-2001 Christopher M. Smith & The Regents of the University of California